Merge pull request #79 from mpi2/dev

v2.0.1: EYE data bugfix

Author: marinak-ebi

Late adults stats pipeline/DRrequiredAgeing/DRrequiredAgeingPackage/inst/extdata/CategoryMap.conf

@@ -10,4 +10,8 @@ no data left eye, present right eye:present right eye
 no data right eye, present left eye:present left eye
 no data left eye, right eye abnormal:right eye abnormal
 no data right eye, left eye abnormal:left eye abnormal
+no data right eye, left eye dilated:left eye dilated
+no data left eye, right eye dilated:right eye dilated
+no data right eye, left eye closed:left eye closed
+no data left eye, right eye closed:right eye closed
 Is_this_file_finished_with_a_new_line_question_mark:0

Late adults stats pipeline/DRrequiredAgeing/DRrequiredAgeingPackage/inst/extdata/MergeParameterList.txt

@@ -562,3 +562,279 @@ BCMLA_EYE_083_001
 BCMLA_EYE_084_001
 BCMLA_EYE_085_001
 BCMLA_EYE_086_001
+TCPLA_EYE_080_001
+TCPLA_EYE_085_001
+TCPLA_EYE_010_001
+TCPLA_EYE_082_001
+TCPLA_EYE_019_001
+TCPLA_EYE_014_001
+TCPLA_EYE_081_001
+TCPLA_EYE_025_001
+TCPLA_EYE_002_001
+TCPLA_EYE_018_001
+TCPLA_EYE_011_001
+TCPLA_EYE_016_001
+TCPLA_EYE_005_001
+TCPLA_EYE_017_001
+TCPLA_EYE_083_001
+TCPLA_EYE_084_001
+TCPLA_EYE_026_001
+TCPLA_EYE_027_001
+TCPLA_EYE_023_001
+TCPLA_EYE_024_001
+TCPLA_EYE_004_001
+TCPLA_EYE_007_001
+TCPLA_EYE_015_001
+TCPLA_EYE_013_001
+TCPLA_EYE_008_001
+TCPLA_EYE_006_001
+TCPLA_EYE_086_001
+TCPLA_EYE_009_001
+TCPLA_EYE_012_001
+TCPLA_EYE_003_001
+UCDLA_EYE_011_001
+UCDLA_EYE_082_001
+UCDLA_EYE_083_001
+UCDLA_EYE_002_001
+UCDLA_EYE_084_001
+UCDLA_EYE_023_001
+UCDLA_EYE_015_001
+UCDLA_EYE_004_001
+UCDLA_EYE_027_001
+UCDLA_EYE_013_001
+UCDLA_EYE_016_001
+UCDLA_EYE_009_001
+UCDLA_EYE_080_001
+UCDLA_EYE_003_001
+UCDLA_EYE_007_001
+UCDLA_EYE_085_001
+UCDLA_EYE_086_001
+UCDLA_EYE_018_001
+UCDLA_EYE_008_001
+UCDLA_EYE_012_001
+UCDLA_EYE_081_001
+UCDLA_EYE_010_001
+UCDLA_EYE_019_001
+UCDLA_EYE_024_001
+UCDLA_EYE_026_001
+UCDLA_EYE_005_001
+UCDLA_EYE_017_001
+UCDLA_EYE_025_001
+UCDLA_EYE_014_001
+UCDLA_EYE_006_001
+ICSLA_EYE_015_001
+ICSLA_EYE_003_001
+ICSLA_EYE_010_001
+ICSLA_EYE_006_001
+ICSLA_EYE_084_001
+ICSLA_EYE_005_001
+ICSLA_EYE_085_001
+ICSLA_EYE_009_001
+ICSLA_EYE_017_001
+ICSLA_EYE_027_001
+ICSLA_EYE_019_001
+ICSLA_EYE_018_001
+ICSLA_EYE_013_001
+ICSLA_EYE_014_001
+ICSLA_EYE_083_001
+ICSLA_EYE_002_001
+ICSLA_EYE_012_001
+ICSLA_EYE_007_001
+ICSLA_EYE_086_001
+ICSLA_EYE_026_001
+ICSLA_EYE_008_001
+ICSLA_EYE_016_001
+ICSLA_EYE_080_001
+ICSLA_EYE_082_001
+ICSLA_EYE_024_001
+ICSLA_EYE_081_001
+ICSLA_EYE_025_001
+ICSLA_EYE_023_001
+ICSLA_EYE_004_001
+ICSLA_EYE_011_001
+NINGLA_EYE_081_001
+NINGLA_EYE_014_001
+NINGLA_EYE_024_001
+NINGLA_EYE_085_001
+NINGLA_EYE_025_001
+NINGLA_EYE_017_001
+NINGLA_EYE_010_001
+NINGLA_EYE_027_001
+NINGLA_EYE_002_001
+NINGLA_EYE_008_001
+NINGLA_EYE_009_001
+NINGLA_EYE_016_001
+NINGLA_EYE_082_001
+NINGLA_EYE_086_001
+NINGLA_EYE_006_001
+NINGLA_EYE_022_001
+NINGLA_EYE_004_001
+NINGLA_EYE_020_001
+NINGLA_EYE_011_001
+NINGLA_EYE_019_001
+NINGLA_EYE_083_001
+NINGLA_EYE_080_001
+NINGLA_EYE_018_001
+NINGLA_EYE_026_001
+NINGLA_EYE_012_001
+NINGLA_EYE_003_001
+NINGLA_EYE_084_001
+NINGLA_EYE_013_001
+NINGLA_EYE_005_001
+NINGLA_EYE_023_001
+NINGLA_EYE_021_001
+NINGLA_EYE_007_001
+NINGLA_EYE_015_001
+KMPCLA_EYE_013_001
+KMPCLA_EYE_083_001
+KMPCLA_EYE_025_001
+KMPCLA_EYE_002_001
+KMPCLA_EYE_005_001
+KMPCLA_EYE_008_001
+KMPCLA_EYE_084_001
+KMPCLA_EYE_018_001
+KMPCLA_EYE_024_001
+KMPCLA_EYE_010_001
+KMPCLA_EYE_017_001
+KMPCLA_EYE_011_001
+KMPCLA_EYE_020_001
+KMPCLA_EYE_085_001
+KMPCLA_EYE_015_001
+KMPCLA_EYE_003_001
+KMPCLA_EYE_026_001
+KMPCLA_EYE_004_001
+KMPCLA_EYE_027_001
+KMPCLA_EYE_021_001
+KMPCLA_EYE_014_001
+KMPCLA_EYE_081_001
+KMPCLA_EYE_019_001
+KMPCLA_EYE_080_001
+KMPCLA_EYE_016_001
+KMPCLA_EYE_012_001
+KMPCLA_EYE_006_001
+KMPCLA_EYE_022_001
+KMPCLA_EYE_023_001
+KMPCLA_EYE_086_001
+KMPCLA_EYE_009_001
+KMPCLA_EYE_082_001
+KMPCLA_EYE_007_001
+TCPLA_EYE_002_001
+TCPLA_EYE_003_001
+TCPLA_EYE_004_001
+TCPLA_EYE_005_001
+TCPLA_EYE_006_001
+TCPLA_EYE_007_001
+TCPLA_EYE_008_001
+TCPLA_EYE_009_001
+TCPLA_EYE_010_001
+TCPLA_EYE_011_001
+TCPLA_EYE_012_001
+TCPLA_EYE_013_001
+TCPLA_EYE_014_001
+TCPLA_EYE_015_001
+TCPLA_EYE_016_001
+TCPLA_EYE_017_001
+TCPLA_EYE_018_001
+TCPLA_EYE_019_001
+TCPLA_EYE_023_001
+TCPLA_EYE_024_001
+TCPLA_EYE_025_001
+TCPLA_EYE_026_001
+TCPLA_EYE_027_001
+TCPLA_EYE_080_001
+TCPLA_EYE_081_001
+TCPLA_EYE_082_001
+TCPLA_EYE_083_001
+TCPLA_EYE_084_001
+TCPLA_EYE_085_001
+TCPLA_EYE_086_001
+UCDLA_EYE_002_001
+UCDLA_EYE_003_001
+UCDLA_EYE_004_001
+UCDLA_EYE_005_001
+UCDLA_EYE_006_001
+UCDLA_EYE_007_001
+UCDLA_EYE_008_001
+UCDLA_EYE_009_001
+UCDLA_EYE_010_001
+UCDLA_EYE_011_001
+UCDLA_EYE_012_001
+UCDLA_EYE_013_001
+UCDLA_EYE_014_001
+UCDLA_EYE_015_001
+UCDLA_EYE_016_001
+UCDLA_EYE_017_001
+UCDLA_EYE_018_001
+UCDLA_EYE_019_001
+UCDLA_EYE_023_001
+UCDLA_EYE_024_001
+UCDLA_EYE_025_001
+UCDLA_EYE_026_001
+UCDLA_EYE_027_001
+UCDLA_EYE_080_001
+UCDLA_EYE_081_001
+UCDLA_EYE_082_001
+UCDLA_EYE_083_001
+UCDLA_EYE_084_001
+UCDLA_EYE_085_001
+UCDLA_EYE_086_001
+ICSLA_EYE_002_001
+ICSLA_EYE_003_001
+ICSLA_EYE_004_001
+ICSLA_EYE_005_001
+ICSLA_EYE_006_001
+ICSLA_EYE_007_001
+ICSLA_EYE_008_001
+ICSLA_EYE_009_001
+ICSLA_EYE_010_001
+ICSLA_EYE_011_001
+ICSLA_EYE_012_001
+ICSLA_EYE_013_001
+ICSLA_EYE_014_001
+ICSLA_EYE_015_001
+ICSLA_EYE_016_001
+ICSLA_EYE_017_001
+ICSLA_EYE_018_001
+ICSLA_EYE_019_001
+ICSLA_EYE_023_001
+ICSLA_EYE_024_001
+ICSLA_EYE_025_001
+ICSLA_EYE_026_001
+ICSLA_EYE_027_001
+ICSLA_EYE_080_001
+ICSLA_EYE_081_001
+ICSLA_EYE_082_001
+ICSLA_EYE_083_001
+ICSLA_EYE_084_001
+ICSLA_EYE_085_001
+ICSLA_EYE_086_001
+KMPCLA_EYE_002_001
+KMPCLA_EYE_003_001
+KMPCLA_EYE_004_001
+KMPCLA_EYE_005_001
+KMPCLA_EYE_006_001
+KMPCLA_EYE_007_001
+KMPCLA_EYE_008_001
+KMPCLA_EYE_009_001
+KMPCLA_EYE_010_001
+KMPCLA_EYE_011_001
+KMPCLA_EYE_012_001
+KMPCLA_EYE_013_001
+KMPCLA_EYE_014_001
+KMPCLA_EYE_015_001
+KMPCLA_EYE_016_001
+KMPCLA_EYE_017_001
+KMPCLA_EYE_018_001
+KMPCLA_EYE_019_001
+KMPCLA_EYE_023_001
+KMPCLA_EYE_024_001
+KMPCLA_EYE_025_001
+KMPCLA_EYE_026_001
+KMPCLA_EYE_027_001
+KMPCLA_EYE_080_001
+KMPCLA_EYE_081_001
+KMPCLA_EYE_082_001
+KMPCLA_EYE_083_001
+KMPCLA_EYE_084_001
+KMPCLA_EYE_085_001
+KMPCLA_EYE_086_001